STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111235377FH2 domain-containing protein. (1540 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
      
 0.606
pfn2
Profilin; Belongs to the profilin family.
    
 0.549
LOC111229108
Profilin; Belongs to the profilin family.
    
 0.549
ENSSDUP00000032139
Profilin; Belongs to the profilin family.
    
 0.549
LOC111227737
Spire-type actin nucleation factor 1b.
    
 0.542
LOC111223386
Spire-type actin nucleation factor 1a.
    
 0.542
fyttd1
Uncharacterized protein.
    
 0.528
LOC111220443
Growth arrest specific 7.
    
 0.472
gas7
Growth arrest-specific 7a.
    
 0.472
LOC111223136
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.469
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.