STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
krr1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (399 aa)    
Predicted Functional Partners:
utp11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.986
nop14
NOP14 nucleolar protein homolog (yeast).
   
 0.981
wdr46
WD repeat domain 46.
   
 0.980
utp3
UTP3 small subunit processome component.
   
 0.979
rrp7a
Ribosomal RNA processing 7 homolog A.
   
 0.978
utp18
WD_REPEATS_REGION domain-containing protein.
   
 0.975
utp23
UTP23 small subunit processome component.
   
 0.975
ngdn
Neuroguidin, EIF4E binding protein.
   
 0.975
UTP14C
UTP14C small subunit processome component.
   
 0.973
bysl
Bystin-like.
   
 
 0.971
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.