STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111237400Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (490 aa)    
Predicted Functional Partners:
bmp2
Bone morphogenetic protein 2b.
    
 0.975
bmp4
Bone morphogenetic protein 4.
    
 0.975
LOC111228116
Inhibin subunit beta B.
    
 0.965
INHBB
TGF_BETA_2 domain-containing protein.
    
 0.965
LOC111237335
TGF_BETA_2 domain-containing protein.
    
 0.965
LOC111237408
Inhibin subunit beta Aa.
    
 0.965
LOC111218187
Myostatin b.
    
 0.962
gdf11
Growth differentiation factor 11.
    
 0.957
LOC111222679
Myostatin a.
    
 0.955
bmp5
Bone morphogenetic protein 5.
    
 0.953
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.