STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trirTelomerase RNA component interacting RNase. (157 aa)    
Predicted Functional Partners:
LOC111229433
Cytochrome c oxidase subunit 7C.
   
 0.989
LOC111223538
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.984
LOC111234184
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
 0.978
COX5A
Cytochrome c oxidase subunit 5Ab.
   
 0.969
LOC111229626
Uncharacterized protein.
   
 0.969
LOC111226642
Ubiquinol-cytochrome c reductase, complex III subunit VII.
   
 0.965
LOC111220555
Cytochrome c oxidase subunit 5B2.
   
 0.961
COX5B
Cytochrome c oxidase subunit 5B.
   
 0.961
LOC111229454
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.957
LOC111217562
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.957
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.