STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnni2Troponin I type 2a (skeletal, fast), tandem duplicate 1. (178 aa)    
Predicted Functional Partners:
LOC111234726
Troponin C type 2 (fast).
   
 0.939
ENSSDUP00000023277
Troponin T type 3a (skeletal, fast).
 
 0.816
LOC111224534
Uncharacterized protein.
 
 0.808
ENSSDUP00000025183
Uncharacterized protein.
 
 0.804
TNNT1
Troponin T1, slow skeletal type.
 
 0.804
LOC111218131
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.799
TNNC1
Troponin C type 1a (slow).
   
 0.767
LOC111233765
Troponin C type 1b (slow).
   
 0.767
ENSSDUP00000000437
Uncharacterized protein.
 
 
 0.765
LOC111223757
Troponin T type 1 (skeletal, slow).
 
 
 0.765
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.