STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000023744ANK_REP_REGION domain-containing protein. (302 aa)    
Predicted Functional Partners:
CASKIN1
CASK interacting protein 1.
 
      0.899
ENSSDUP00000023710
SAM domain-containing protein.
 
      0.795
LOC111233555
Ankyrin repeat and sterile alpha motif domain containing 1Ab.
 
      0.781
LOC111227569
Fras1 related extracellular matrix 1b.
   
  0.542
frem1
Fras1 related extracellular matrix 1a.
   
  0.542
rfxank
Regulatory factor X-associated ankyrin-containing protein.
  
     0.509
ENSSDUP00000013924
ANK_REP_REGION domain-containing protein.
  
  0.494
mtpn
Myotrophin.
  
     0.486
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.466
CASK-2
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.466
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.