STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znhit3Zinc finger, HIT-type containing 3. (148 aa)    
Predicted Functional Partners:
ZNHIT6
Zinc finger HIT-type containing 6.
    
 
 0.663
nufip1
C2H2-type domain-containing protein.
    
 
 0.657
pih1d1
PIH1 domain containing 1.
      
 0.588
mrm1
Mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae).
      
 0.585
znhit2
Zinc finger, HIT-type containing 2.
      
 0.579
tada2a
Transcriptional adapter.
    
 
 0.571
pigw
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
      
 0.559
rmnd5b
Required for meiotic nuclear division 5 homolog B.
      
 0.537
snu13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.534
tti1
TELO2 interacting protein 1.
      
 0.534
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.