Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDA1 | LOC111219492 | ENSSDUP00000014404 | ENSSDUP00000023860 | DET1 and DDB1 associated 1. | LisH domain-containing protein. | 0.621 |
DDA1 | cul4a | ENSSDUP00000014404 | ENSSDUP00000007295 | DET1 and DDB1 associated 1. | Cullin 4A; Belongs to the cullin family. | 0.838 |
DDA1 | cul4b | ENSSDUP00000014404 | ENSSDUP00000008000 | DET1 and DDB1 associated 1. | Cullin 4B; Belongs to the cullin family. | 0.838 |
DDA1 | ddb1 | ENSSDUP00000014404 | ENSSDUP00000006352 | DET1 and DDB1 associated 1. | Damage-specific DNA binding protein 1. | 0.973 |
DDA1 | rbx1 | ENSSDUP00000014404 | ENSSDUP00000000052 | DET1 and DDB1 associated 1. | Ring-box 1, E3 ubiquitin protein ligase. | 0.679 |
DDA1 | rnf7 | ENSSDUP00000014404 | ENSSDUP00000028880 | DET1 and DDB1 associated 1. | Ring finger protein 7. | 0.554 |
ENSSDUP00000023161 | LOC111219492 | ENSSDUP00000023161 | ENSSDUP00000023860 | Uncharacterized protein. | LisH domain-containing protein. | 0.713 |
ENSSDUP00000023161 | ddb1 | ENSSDUP00000023161 | ENSSDUP00000006352 | Uncharacterized protein. | Damage-specific DNA binding protein 1. | 0.401 |
ENSSDUP00000023842 | LOC111219492 | ENSSDUP00000023842 | ENSSDUP00000023860 | HD domain-containing protein. | LisH domain-containing protein. | 0.713 |
ENSSDUP00000023842 | ddb1 | ENSSDUP00000023842 | ENSSDUP00000006352 | HD domain-containing protein. | Damage-specific DNA binding protein 1. | 0.401 |
LOC111219311 | LOC111219492 | ENSSDUP00000023778 | ENSSDUP00000023860 | SAM domain and HD domain 1. | LisH domain-containing protein. | 0.713 |
LOC111219311 | ddb1 | ENSSDUP00000023778 | ENSSDUP00000006352 | SAM domain and HD domain 1. | Damage-specific DNA binding protein 1. | 0.401 |
LOC111219492 | DDA1 | ENSSDUP00000023860 | ENSSDUP00000014404 | LisH domain-containing protein. | DET1 and DDB1 associated 1. | 0.621 |
LOC111219492 | ENSSDUP00000023161 | ENSSDUP00000023860 | ENSSDUP00000023161 | LisH domain-containing protein. | Uncharacterized protein. | 0.713 |
LOC111219492 | ENSSDUP00000023842 | ENSSDUP00000023860 | ENSSDUP00000023842 | LisH domain-containing protein. | HD domain-containing protein. | 0.713 |
LOC111219492 | LOC111219311 | ENSSDUP00000023860 | ENSSDUP00000023778 | LisH domain-containing protein. | SAM domain and HD domain 1. | 0.713 |
LOC111219492 | cul4a | ENSSDUP00000023860 | ENSSDUP00000007295 | LisH domain-containing protein. | Cullin 4A; Belongs to the cullin family. | 0.836 |
LOC111219492 | cul4b | ENSSDUP00000023860 | ENSSDUP00000008000 | LisH domain-containing protein. | Cullin 4B; Belongs to the cullin family. | 0.836 |
LOC111219492 | ddb1 | ENSSDUP00000023860 | ENSSDUP00000006352 | LisH domain-containing protein. | Damage-specific DNA binding protein 1. | 0.936 |
LOC111219492 | rbx1 | ENSSDUP00000023860 | ENSSDUP00000000052 | LisH domain-containing protein. | Ring-box 1, E3 ubiquitin protein ligase. | 0.909 |
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