STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000023868Uncharacterized protein. (749 aa)    
Predicted Functional Partners:
ENSSDUP00000023929
Uncharacterized protein.
 
     
0.899
obsl1
Obscurin-like 1a.
 
     
0.892
wdr18
WD repeat domain 18.
   
 0.582
tex10
Testis expressed 10.
   
 0.545
stk17b
Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.
 
  
   0.539
ENSSDUP00000005999
Uncharacterized protein.
 
     
0.534
LOC111230605
Si:dkey-240h12.4; Belongs to the protein kinase superfamily.
 
  
   0.525
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.500
LOC111218228
Obscurin-like 1b.
 
     
0.473
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.