STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35e3Solute carrier family 35 member E3. (313 aa)    
Predicted Functional Partners:
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
 
    
 0.731
slc35c1
Solute carrier family 35 member C1.
      
 0.606
cunh15orf40
Uncharacterized protein.
   
    0.596
slc35g1
Solute carrier family 35 member G1.
      
 0.592
rnf217
RBR-type E3 ubiquitin transferase.
      
 0.560
dcxr
Dicarbonyl/L-xylulose reductase.
      
 0.485
mdm2
MDM2 proto-oncogene.
 
    
 0.480
slc35f3
Solute carrier family 35 member F3b.
      
 0.465
tgds
NAD(P)-bd_dom domain-containing protein.
   
 
 0.452
Slc35b2
Solute carrier family 35 member B2.
    
 
 0.430
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.