Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPL5 | RPL5-2 | ENSSDUP00000016017 | ENSSDUP00000031213 | Ribosomal protein L5. | Ribosomal protein L5b. | 0.900 |
RPL5 | ca12 | ENSSDUP00000016017 | ENSSDUP00000012062 | Ribosomal protein L5. | Carbonic anhydrase XII; Belongs to the alpha-carbonic anhydrase family. | 0.448 |
RPL5 | ca14 | ENSSDUP00000016017 | ENSSDUP00000009240 | Ribosomal protein L5. | Carbonic anhydrase XIV; Belongs to the alpha-carbonic anhydrase family. | 0.448 |
RPL5 | ca4 | ENSSDUP00000016017 | ENSSDUP00000023900 | Ribosomal protein L5. | Carbonic anhydrase IV a; Belongs to the alpha-carbonic anhydrase family. | 0.448 |
RPL5 | grwd1 | ENSSDUP00000016017 | ENSSDUP00000012080 | Ribosomal protein L5. | Glutamate-rich WD repeat containing 1. | 0.456 |
RPL5 | gtpbp4 | ENSSDUP00000016017 | ENSSDUP00000008962 | Ribosomal protein L5. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.928 |
RPL5 | nle1 | ENSSDUP00000016017 | ENSSDUP00000004559 | Ribosomal protein L5. | Notchless homolog 1 (Drosophila). | 0.843 |
RPL5 | rpf2 | ENSSDUP00000016017 | ENSSDUP00000014281 | Ribosomal protein L5. | Ribosome production factor 2 homolog. | 0.942 |
RPL5 | rpl11 | ENSSDUP00000016017 | ENSSDUP00000011312 | Ribosomal protein L5. | Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. | 0.995 |
RPL5 | tsr2 | ENSSDUP00000016017 | ENSSDUP00000026819 | Ribosomal protein L5. | TSR2 ribosome maturation factor. | 0.426 |
RPL5-2 | RPL5 | ENSSDUP00000031213 | ENSSDUP00000016017 | Ribosomal protein L5b. | Ribosomal protein L5. | 0.900 |
RPL5-2 | ca12 | ENSSDUP00000031213 | ENSSDUP00000012062 | Ribosomal protein L5b. | Carbonic anhydrase XII; Belongs to the alpha-carbonic anhydrase family. | 0.448 |
RPL5-2 | ca14 | ENSSDUP00000031213 | ENSSDUP00000009240 | Ribosomal protein L5b. | Carbonic anhydrase XIV; Belongs to the alpha-carbonic anhydrase family. | 0.448 |
RPL5-2 | ca4 | ENSSDUP00000031213 | ENSSDUP00000023900 | Ribosomal protein L5b. | Carbonic anhydrase IV a; Belongs to the alpha-carbonic anhydrase family. | 0.448 |
RPL5-2 | grwd1 | ENSSDUP00000031213 | ENSSDUP00000012080 | Ribosomal protein L5b. | Glutamate-rich WD repeat containing 1. | 0.456 |
RPL5-2 | gtpbp4 | ENSSDUP00000031213 | ENSSDUP00000008962 | Ribosomal protein L5b. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.928 |
RPL5-2 | nle1 | ENSSDUP00000031213 | ENSSDUP00000004559 | Ribosomal protein L5b. | Notchless homolog 1 (Drosophila). | 0.843 |
RPL5-2 | rpf2 | ENSSDUP00000031213 | ENSSDUP00000014281 | Ribosomal protein L5b. | Ribosome production factor 2 homolog. | 0.942 |
RPL5-2 | rpl11 | ENSSDUP00000031213 | ENSSDUP00000011312 | Ribosomal protein L5b. | Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. | 0.995 |
RPL5-2 | tsr2 | ENSSDUP00000031213 | ENSSDUP00000026819 | Ribosomal protein L5b. | TSR2 ribosome maturation factor. | 0.426 |
page 1 of 6