STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc22a16Solute carrier family 22 member 16. (565 aa)    
Predicted Functional Partners:
smox
Spermine oxidase.
      
 0.556
slc22a18
Solute carrier family 22 member 18.
   
  
 0.548
ints9
Integrator complex subunit 9.
    
 0.527
slc25a16
Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.522
ints1
Integrator complex subunit 1.
    
 0.518
ints11
Integrator complex subunit 11.
    
 0.510
ints4
Integrator complex subunit 4.
    
 0.501
ints3
Integrator complex subunit 3.
    
 0.497
ints7
Integrator complex subunit 7.
    
 0.495
ints13
Integrator complex subunit 13.
    
 0.493
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.