STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kri1KRI1 homolog. (770 aa)    
Predicted Functional Partners:
ENSSDUP00000023287
Uncharacterized protein.
   
 
 0.960
krr1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.960
LOC111225165
Zona pellucida glycoprotein d.
   
 
 0.960
nop14
NOP14 nucleolar protein homolog (yeast).
   
 
 0.921
esf1
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).
   
  
 0.912
utp23
UTP23 small subunit processome component.
   
 
 0.899
POP1
POP1 homolog, ribonuclease P/MRP subunit.
   
   0.894
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 
 0.889
noc2l
NOC2-like nucleolar associated transcriptional repressor.
   
  
 0.886
utp3
UTP3 small subunit processome component.
   
  
 0.886
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.