STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhx9DEAH (Asp-Glu-Ala-His) box helicase 9. (1178 aa)    
Predicted Functional Partners:
ilf3
Interleukin enhancer binding factor 3b.
   
 
 0.866
ENSSDUP00000002880
Heterogeneous nuclear ribonucleoprotein M.
   
 0.831
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.822
ilf2
Interleukin enhancer binding factor 2.
   
 
 0.820
alyref
Aly/REF export factor.
   
 0.818
LOC111217580
Intersectin 2b.
   
  0.813
itsn2
Intersectin 2a.
   
  0.813
pabpn1
Poly(A) binding protein, nuclear 1.
   
 0.805
msl1
MSL complex subunit 1b.
   
 0.799
PABPN1L
Poly(A) binding protein nuclear 1 like, cytoplasmic.
   
 0.795
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.