STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
drap1DR1-associated protein 1 (negative cofactor 2 alpha). (198 aa)    
Predicted Functional Partners:
dr1
Down-regulator of transcription 1.
   
 
 0.996
btaf1
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.
    
 
 0.950
tbp
TATA box binding protein.
    
 
 0.882
LOC111237051
Uncharacterized protein.
    
 
 0.882
tbpl2
TATA box binding protein like 2.
    
 
 0.882
foxh1
Forkhead box H1.
    
 0.858
gtf2b
General transcription factor IIB.
    
 
 0.716
tbpl1
TBP-like 1.
    
 
 0.659
Cunh11orf88
Uncharacterized protein.
    
 
 0.659
nfyb
Nuclear transcription factor Y, beta a.
    
 
 0.561
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.