Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000030530 | birc6 | ENSSDUP00000030530 | ENSSDUP00000030515 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Baculoviral IAP repeat containing 6. | 0.968 |
ENSSDUP00000030530 | mib2 | ENSSDUP00000030530 | ENSSDUP00000004034 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Mindbomb E3 ubiquitin protein ligase 2. | 0.714 |
ENSSDUP00000030530 | pask | ENSSDUP00000030530 | ENSSDUP00000024461 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | PAS domain containing serine/threonine kinase. | 0.473 |
LOC111217580 | itsn2 | ENSSDUP00000001735 | ENSSDUP00000016866 | Intersectin 2b. | Intersectin 2a. | 0.958 |
LOC111217580 | pask | ENSSDUP00000001735 | ENSSDUP00000024461 | Intersectin 2b. | PAS domain containing serine/threonine kinase. | 0.480 |
LOC111227074 | pask | ENSSDUP00000021105 | ENSSDUP00000024461 | Cardiomyopathy associated 5. | PAS domain containing serine/threonine kinase. | 0.601 |
LOC111227428 | LOC111232924 | ENSSDUP00000028299 | ENSSDUP00000024691 | UTP--glucose-1-phosphate uridylyltransferase. | UTP--glucose-1-phosphate uridylyltransferase. | 0.900 |
LOC111227428 | pask | ENSSDUP00000028299 | ENSSDUP00000024461 | UTP--glucose-1-phosphate uridylyltransferase. | PAS domain containing serine/threonine kinase. | 0.636 |
LOC111232924 | LOC111227428 | ENSSDUP00000024691 | ENSSDUP00000028299 | UTP--glucose-1-phosphate uridylyltransferase. | UTP--glucose-1-phosphate uridylyltransferase. | 0.900 |
LOC111232924 | pask | ENSSDUP00000024691 | ENSSDUP00000024461 | UTP--glucose-1-phosphate uridylyltransferase. | PAS domain containing serine/threonine kinase. | 0.636 |
birc6 | ENSSDUP00000030530 | ENSSDUP00000030515 | ENSSDUP00000030530 | Baculoviral IAP repeat containing 6. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.968 |
birc6 | mib2 | ENSSDUP00000030515 | ENSSDUP00000004034 | Baculoviral IAP repeat containing 6. | Mindbomb E3 ubiquitin protein ligase 2. | 0.714 |
birc6 | pask | ENSSDUP00000030515 | ENSSDUP00000024461 | Baculoviral IAP repeat containing 6. | PAS domain containing serine/threonine kinase. | 0.473 |
itsn2 | LOC111217580 | ENSSDUP00000016866 | ENSSDUP00000001735 | Intersectin 2a. | Intersectin 2b. | 0.958 |
itsn2 | pask | ENSSDUP00000016866 | ENSSDUP00000024461 | Intersectin 2a. | PAS domain containing serine/threonine kinase. | 0.480 |
mib2 | ENSSDUP00000030530 | ENSSDUP00000004034 | ENSSDUP00000030530 | Mindbomb E3 ubiquitin protein ligase 2. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.714 |
mib2 | birc6 | ENSSDUP00000004034 | ENSSDUP00000030515 | Mindbomb E3 ubiquitin protein ligase 2. | Baculoviral IAP repeat containing 6. | 0.714 |
mib2 | pask | ENSSDUP00000004034 | ENSSDUP00000024461 | Mindbomb E3 ubiquitin protein ligase 2. | PAS domain containing serine/threonine kinase. | 0.464 |
pask | ENSSDUP00000030530 | ENSSDUP00000024461 | ENSSDUP00000030530 | PAS domain containing serine/threonine kinase. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.473 |
pask | LOC111217580 | ENSSDUP00000024461 | ENSSDUP00000001735 | PAS domain containing serine/threonine kinase. | Intersectin 2b. | 0.480 |
page 1 of 2