STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
krasV-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (189 aa)    
Predicted Functional Partners:
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
   
 0.980
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
   
 0.975
braf
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.975
LOC111227828
A-Raf proto-oncogene, serine/threonine kinase.
   
 0.974
Nf1
Uncharacterized protein.
    
 0.972
sos2
Son of sevenless homolog 2 (Drosophila).
   
 0.965
rassf5
Ras association domain family member 5.
    
 0.957
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
   
 0.955
RASA2
RAS p21 protein activator 2.
    
 0.951
prkce
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 0.941
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.