STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc12DnaJ (Hsp40) homolog, subfamily C, member 12. (169 aa)    
Predicted Functional Partners:
gchfr
GTP cyclohydrolase I feedback regulator.
      
 0.596
dnajc1
DnaJ (Hsp40) homolog, subfamily C, member 1.
      
 0.588
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.584
gak
Cyclin G associated kinase.
    
 
 0.476
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
      
 0.465
rdm1
RRM domain-containing protein.
      
 0.463
LOC111227074
Cardiomyopathy associated 5.
      
 0.452
pah
Phenylalanine hydroxylase.
    
 
 0.442
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
    
 
0.438
dnajc25
DnaJ (Hsp40) homolog, subfamily C, member 25.
    
 
 0.438
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.