STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111227336Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2; Belongs to the protein kinase superfamily. (454 aa)    
Predicted Functional Partners:
mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
 
  
 0.763
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.745
calm3
Calmodulin 3.
   
 0.745
LOC111216424
Calmodulin.
   
 0.745
LOC111225267
Calmodulin.
   
 0.745
lin7c
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.676
lin7b
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.676
lin7a
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.676
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.629
ENSSDUP00000000294
PDZ domain-containing protein.
    
 0.628
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.