STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekhg7Pleckstrin homology domain containing, family G (with RhoGef domain) member 7. (420 aa)    
Predicted Functional Partners:
ENSSDUP00000024754
Uncharacterized protein.
 
      0.874
LOC111220854
Tumor necrosis factor a (TNF superfamily, member 2).
    
 0.744
tradd
Tnfrsf1a-associated via death domain.
    
 0.732
LOC111222585
Tumor necrosis factor b (TNF superfamily, member 2).
    
 0.637
wdfy3
WD repeat and FYVE domain containing 3.
    
 0.567
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.524
optn
Optineurin.
    
 0.524
birc6
Baculoviral IAP repeat containing 6.
    
 0.502
ENSSDUP00000030530
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.502
bag3
BCL2 associated athanogene 3.
    
 0.481
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.