STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alpk1Alpha-type protein kinase domain-containing protein. (1142 aa)    
Predicted Functional Partners:
tifa
Si:ch211-15b10.6.
   
 
 0.865
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
     
 0.662
LOC111229469
Tudor domain containing 7 a.
   
    0.535
LOC111231308
Tudor domain containing 7 b.
   
    0.535
map3k7
Mitogen-activated protein kinase kinase kinase 7.
     
 0.505
ENSSDUP00000029748
Protein kinase domain-containing protein.
     
 0.505
agmo
Alkylglycerol monooxygenase; Belongs to the sterol desaturase family.
      
 0.477
irak1
Interleukin-1 receptor-associated kinase 1.
     
 0.423
LOC111228953
Protein kinase domain-containing protein.
     
 0.422
map3k20
Uncharacterized protein.
     
 0.422
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.