STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
megf10Multiple EGF-like-domains 10. (1126 aa)    
Predicted Functional Partners:
LAMA2
Laminin subunit alpha 2.
    
 
0.592
gulp1
GULP PTB domain containing engulfment adaptor 1a.
   
 
 0.561
c6
Complement component 6.
   
  0.457
itgb4
Integrin beta.
   
 0.430
itga3
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
    
 0.417
ENSSDUP00000033017
Uncharacterized protein.
    
 0.417
lama5
Laminin, alpha 5.
    
 
0.413
ENSSDUP00000010761
Si:ch211-241e1.3.
    
  0.413
Lama3
Uncharacterized protein.
    
  0.413
lama4
Laminin, alpha 4.
    
 
0.413
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.