STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CebpdCCAAT/enhancer-binding protein. (300 aa)    
Predicted Functional Partners:
LOC111235085
CCAAT enhancer binding protein beta.
   
0.814
COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
 0.647
LOC111229433
Cytochrome c oxidase subunit 7C.
   
 0.603
LOC111217245
Kruppel-like factor 5 like.
    
 0.590
LOC111218842
Kruppel-like factor 5b.
    
 0.590
klf5
Progesterone immunomodulatory binding factor 1.
    
 0.590
COX5A
Cytochrome c oxidase subunit 5Ab.
   
 0.588
LOC111229626
Uncharacterized protein.
   
 0.588
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.582
PPARA
Peroxisome proliferator-activated receptor alpha b.
    
 0.582
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (22%) [HD]