STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111226944Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide. (94 aa)    
Predicted Functional Partners:
syk
Tyrosine-protein kinase.
   
 0.989
tyrobp
Uncharacterized protein.
   
  
 0.970
LOC111230100
C-type lectin domain-containing protein.
   
 0.920
LOC111230090
Si:ch73-86n18.1.
   
 0.920
LOC111225667
Tyrosine-protein kinase.
   
 0.899
AIF1
Allograft inflammatory factor 1.
   
  
 0.715
ENSSDUP00000032514
Lymphocyte cytosolic protein 2a.
   
 
 0.685
LOC111235530
Uncharacterized protein.
    
 
 0.619
ENSSDUP00000012056
Uncharacterized protein.
   
 0.578
ENSSDUP00000012077
Uncharacterized protein.
   
 0.578
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.