STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111227344Solute carrier family 39 member 14. (511 aa)    
Predicted Functional Partners:
slc30a4
Solute carrier family 30 member 4.
   
 0.542
slc39a9
Solute carrier family 39 member 9.
    
 
 0.542
slc30a3
Solute carrier family 30 member 2.
    
 
 0.539
s100z
Protein S100; Belongs to the S-100 family.
    
 0.533
LOC111238666
Si:dkeyp-86f7.4.
      
 0.511
slc30a6
Solute carrier family 30 member 6.
  
 0.495
slc30a1
Solute carrier family 30 member 1a.
  
 0.491
ENSSDUP00000007838
Uncharacterized protein.
  
 0.491
prpf3
PRP3 pre-mRNA processing factor 3 homolog (yeast).
 
 
    0.480
slc30a5
Solute carrier family 30 member 5.
  
 0.460
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.