STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qpctlGlutaminyl-peptide cyclotransferase-like a. (394 aa)    
Predicted Functional Partners:
nudt22
Nudix (nucleoside diphosphate linked moiety X)-type motif 22.
      
 0.533
ostm1
Osteoclastogenesis associated transmembrane protein 1.
   
  
 0.499
CRISP3
Cysteine rich secretory protein 3; Belongs to the CRISP family.
   
 
 0.434
ENSSDUP00000015653
ShKT domain-containing protein; Belongs to the CRISP family.
   
 
 0.434
ZNHIT6
Zinc finger HIT-type containing 6.
      
 0.426
ufm1
Ubiquitin-fold modifier 1.
      
 0.424
trabd
TraB domain containing.
      
 0.420
bckdk
Protein-serine/threonine kinase.
      
 0.418
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.