clip4 protein (Seriola dumerili) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

clip4

Uncharacterized protein. (764 aa)

Predicted Functional Partners:

cyld

0.554

LOC111221813

0.554

LOC111227570

0.554

LOC111238617

0.532

tnfrsf1a

0.516

ripk1

0.516

xiap

0.500

phkb

0.499

bub3

0.483

rps27a

0.456

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111221813	LOC111238617	ENSSDUP00000027503	ENSSDUP00000019813	Cylindromatosis (turban tumor syndrome), b.	Uncharacterized protein.	0.908
LOC111221813	clip4	ENSSDUP00000027503	ENSSDUP00000025382	Cylindromatosis (turban tumor syndrome), b.	Uncharacterized protein.	0.554
LOC111221813	cyld	ENSSDUP00000027503	ENSSDUP00000008925	Cylindromatosis (turban tumor syndrome), b.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.906
LOC111221813	ripk1	ENSSDUP00000027503	ENSSDUP00000027765	Cylindromatosis (turban tumor syndrome), b.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.980
LOC111221813	rps27a	ENSSDUP00000027503	ENSSDUP00000004225	Cylindromatosis (turban tumor syndrome), b.	Ribosomal protein S27a.	0.874
LOC111221813	tnfrsf1a	ENSSDUP00000027503	ENSSDUP00000015995	Cylindromatosis (turban tumor syndrome), b.	Tumor necrosis factor receptor superfamily, member 1a.	0.922
LOC111221813	xiap	ENSSDUP00000027503	ENSSDUP00000015200	Cylindromatosis (turban tumor syndrome), b.	X-linked inhibitor of apoptosis.	0.563
LOC111227570	clip4	ENSSDUP00000030352	ENSSDUP00000025382	Cylindromatosis (turban tumor syndrome), like.	Uncharacterized protein.	0.554
LOC111227570	ripk1	ENSSDUP00000030352	ENSSDUP00000027765	Cylindromatosis (turban tumor syndrome), like.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.809
LOC111227570	rps27a	ENSSDUP00000030352	ENSSDUP00000004225	Cylindromatosis (turban tumor syndrome), like.	Ribosomal protein S27a.	0.874
LOC111227570	tnfrsf1a	ENSSDUP00000030352	ENSSDUP00000015995	Cylindromatosis (turban tumor syndrome), like.	Tumor necrosis factor receptor superfamily, member 1a.	0.922
LOC111227570	xiap	ENSSDUP00000030352	ENSSDUP00000015200	Cylindromatosis (turban tumor syndrome), like.	X-linked inhibitor of apoptosis.	0.563
LOC111238617	LOC111221813	ENSSDUP00000019813	ENSSDUP00000027503	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), b.	0.908
LOC111238617	clip4	ENSSDUP00000019813	ENSSDUP00000025382	Uncharacterized protein.	Uncharacterized protein.	0.532
LOC111238617	cyld	ENSSDUP00000019813	ENSSDUP00000008925	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.906
LOC111238617	ripk1	ENSSDUP00000019813	ENSSDUP00000027765	Uncharacterized protein.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.980
LOC111238617	rps27a	ENSSDUP00000019813	ENSSDUP00000004225	Uncharacterized protein.	Ribosomal protein S27a.	0.867
LOC111238617	tnfrsf1a	ENSSDUP00000019813	ENSSDUP00000015995	Uncharacterized protein.	Tumor necrosis factor receptor superfamily, member 1a.	0.895
LOC111238617	xiap	ENSSDUP00000019813	ENSSDUP00000015200	Uncharacterized protein.	X-linked inhibitor of apoptosis.	0.544
bub3	clip4	ENSSDUP00000025953	ENSSDUP00000025382	BUB3 mitotic checkpoint protein.	Uncharacterized protein.	0.483