Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111218402 | PLXNA2 | ENSSDUP00000010575 | ENSSDUP00000025471 | Uncharacterized protein; Belongs to the semaphorin family. | Plexin A2. | 0.584 |
LOC111218402 | nrp1 | ENSSDUP00000010575 | ENSSDUP00000005375 | Uncharacterized protein; Belongs to the semaphorin family. | Neuropilin; Belongs to the neuropilin family. | 0.404 |
LOC111218442 | PLXNA2 | ENSSDUP00000005624 | ENSSDUP00000025471 | Sema domain-containing protein; Belongs to the semaphorin family. | Plexin A2. | 0.501 |
LOC111218442 | nrp1 | ENSSDUP00000005624 | ENSSDUP00000005375 | Sema domain-containing protein; Belongs to the semaphorin family. | Neuropilin; Belongs to the neuropilin family. | 0.413 |
LOC111222406 | PLXNA2 | ENSSDUP00000002782 | ENSSDUP00000025471 | Si:ch211-113g11.6; Belongs to the semaphorin family. | Plexin A2. | 0.584 |
LOC111222406 | nrp1 | ENSSDUP00000002782 | ENSSDUP00000005375 | Si:ch211-113g11.6; Belongs to the semaphorin family. | Neuropilin; Belongs to the neuropilin family. | 0.404 |
LOC111224526 | PLXNA2 | ENSSDUP00000003981 | ENSSDUP00000025471 | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. | Plexin A2. | 0.540 |
LOC111224526 | nrp1 | ENSSDUP00000003981 | ENSSDUP00000005375 | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. | Neuropilin; Belongs to the neuropilin family. | 0.894 |
LOC111228474 | PLXNA2 | ENSSDUP00000018892 | ENSSDUP00000025471 | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. | Plexin A2. | 0.540 |
LOC111228474 | nrp1 | ENSSDUP00000018892 | ENSSDUP00000005375 | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. | Neuropilin; Belongs to the neuropilin family. | 0.894 |
PLXNA2 | LOC111218402 | ENSSDUP00000025471 | ENSSDUP00000010575 | Plexin A2. | Uncharacterized protein; Belongs to the semaphorin family. | 0.584 |
PLXNA2 | LOC111218442 | ENSSDUP00000025471 | ENSSDUP00000005624 | Plexin A2. | Sema domain-containing protein; Belongs to the semaphorin family. | 0.501 |
PLXNA2 | LOC111222406 | ENSSDUP00000025471 | ENSSDUP00000002782 | Plexin A2. | Si:ch211-113g11.6; Belongs to the semaphorin family. | 0.584 |
PLXNA2 | LOC111224526 | ENSSDUP00000025471 | ENSSDUP00000003981 | Plexin A2. | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. | 0.540 |
PLXNA2 | LOC111228474 | ENSSDUP00000025471 | ENSSDUP00000018892 | Plexin A2. | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. | 0.540 |
PLXNA2 | nrp1 | ENSSDUP00000025471 | ENSSDUP00000005375 | Plexin A2. | Neuropilin; Belongs to the neuropilin family. | 0.681 |
PLXNA2 | sema3b | ENSSDUP00000025471 | ENSSDUP00000021617 | Plexin A2. | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. | 0.540 |
PLXNA2 | sema3e | ENSSDUP00000025471 | ENSSDUP00000018973 | Plexin A2. | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. | 0.556 |
PLXNA2 | sema3g | ENSSDUP00000025471 | ENSSDUP00000033090 | Plexin A2. | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. | 0.548 |
PLXNA2 | sema7a | ENSSDUP00000025471 | ENSSDUP00000011919 | Plexin A2. | Semaphorin 7A; Belongs to the semaphorin family. | 0.584 |
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