STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kif5aKinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1049 aa)    
Predicted Functional Partners:
LOC111216946
Kinesin light chain 3.
   
 0.768
klc2
TPR_REGION domain-containing protein.
   
 0.766
LOC111220553
TPR_REGION domain-containing protein.
   
 0.763
klc1
Kinesin light chain 1a.
   
 0.763
nphp3
Nephronophthisis 3.
   
 0.705
LOC111225476
Dynactin 1b.
 
  
 0.584
LOC111231327
Dynactin 1a.
 
  
 0.584
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
0.538
cunhxorf38
Uncharacterized protein.
   
 0.517
LOC111230121
Uncharacterized protein.
   
 0.517
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.