STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111238986Zinc finger and BTB domain containing 2b. (528 aa)    
Predicted Functional Partners:
klhl15
Kelch-like family member 15.
    
 0.552
phf21a
PHD finger protein 21Ab.
  
  0.521
CCDC170
Uncharacterized protein.
   
 0.511
rmnd1
Required for meiotic nuclear division 1 homolog.
 
  
 
 0.486
ENSSDUP00000001987
Zinc finger protein 292b.
  
     0.474
tmem33
Transmembrane protein 33.
    
 
 0.473
LOC111230563
Thyroid hormone receptor associated protein 3b.
  
 0.450
armt1
Acidic residue methyltransferase 1.
      
 0.445
setbp1
SET binding protein 1.
  
 0.428
ENSSDUP00000010226
CCAAT enhancer binding protein gamma.
    
 0.413
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.