STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc21bTetratricopeptide repeat domain 21B. (1317 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
   
 0.995
wdr35
WD repeat-containing protein 35.
   
 0.995
wdr19
WD repeat domain 19.
   
 0.994
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.990
IFT43
Intraflagellar transport 43.
    
 0.988
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
  
 0.934
ENSSDUP00000001906
Uncharacterized protein.
   
 0.919
ENSSDUP00000001925
annotation not available
   
 0.919
ift74
Intraflagellar transport 74.
   
 0.876
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
   
 0.875
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.