Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arid5b | ENSSDUP00000025934 | ENSSDUP00000025948 | ENSSDUP00000025934 | AT-rich interaction domain 5B. | Uncharacterized protein. | 0.899 |
Arid5b | kdm7a | ENSSDUP00000025948 | ENSSDUP00000026606 | AT-rich interaction domain 5B. | Lysine (K)-specific demethylase 7Ab. | 0.517 |
ENSSDUP00000000304 | ENSSDUP00000000428 | ENSSDUP00000000304 | ENSSDUP00000000428 | Histone H3; Belongs to the histone H3 family. | Uncharacterized protein. | 0.518 |
ENSSDUP00000000304 | LOC111226470 | ENSSDUP00000000304 | ENSSDUP00000030801 | Histone H3; Belongs to the histone H3 family. | Lysine (K)-specific demethylase 2Ba. | 0.708 |
ENSSDUP00000000304 | kdm7a | ENSSDUP00000000304 | ENSSDUP00000026606 | Histone H3; Belongs to the histone H3 family. | Lysine (K)-specific demethylase 7Ab. | 0.508 |
ENSSDUP00000000304 | setd2 | ENSSDUP00000000304 | ENSSDUP00000009306 | Histone H3; Belongs to the histone H3 family. | SET domain containing 2, histone lysine methyltransferase. | 0.752 |
ENSSDUP00000000304 | suv39h1 | ENSSDUP00000000304 | ENSSDUP00000000827 | Histone H3; Belongs to the histone H3 family. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.685 |
ENSSDUP00000000428 | ENSSDUP00000000304 | ENSSDUP00000000428 | ENSSDUP00000000304 | Uncharacterized protein. | Histone H3; Belongs to the histone H3 family. | 0.518 |
ENSSDUP00000000428 | LOC111226470 | ENSSDUP00000000428 | ENSSDUP00000030801 | Uncharacterized protein. | Lysine (K)-specific demethylase 2Ba. | 0.708 |
ENSSDUP00000000428 | kdm7a | ENSSDUP00000000428 | ENSSDUP00000026606 | Uncharacterized protein. | Lysine (K)-specific demethylase 7Ab. | 0.508 |
ENSSDUP00000000428 | setd2 | ENSSDUP00000000428 | ENSSDUP00000009306 | Uncharacterized protein. | SET domain containing 2, histone lysine methyltransferase. | 0.752 |
ENSSDUP00000000428 | suv39h1 | ENSSDUP00000000428 | ENSSDUP00000000827 | Uncharacterized protein. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. | 0.685 |
ENSSDUP00000025934 | Arid5b | ENSSDUP00000025934 | ENSSDUP00000025948 | Uncharacterized protein. | AT-rich interaction domain 5B. | 0.899 |
ENSSDUP00000025934 | kdm7a | ENSSDUP00000025934 | ENSSDUP00000026606 | Uncharacterized protein. | Lysine (K)-specific demethylase 7Ab. | 0.517 |
LOC111226470 | ENSSDUP00000000304 | ENSSDUP00000030801 | ENSSDUP00000000304 | Lysine (K)-specific demethylase 2Ba. | Histone H3; Belongs to the histone H3 family. | 0.708 |
LOC111226470 | ENSSDUP00000000428 | ENSSDUP00000030801 | ENSSDUP00000000428 | Lysine (K)-specific demethylase 2Ba. | Uncharacterized protein. | 0.708 |
LOC111226470 | kdm7a | ENSSDUP00000030801 | ENSSDUP00000026606 | Lysine (K)-specific demethylase 2Ba. | Lysine (K)-specific demethylase 7Ab. | 0.652 |
LOC111226470 | setd2 | ENSSDUP00000030801 | ENSSDUP00000009306 | Lysine (K)-specific demethylase 2Ba. | SET domain containing 2, histone lysine methyltransferase. | 0.617 |
LOC111226470 | skp1 | ENSSDUP00000030801 | ENSSDUP00000028866 | Lysine (K)-specific demethylase 2Ba. | S-phase kinase-associated protein 1; Belongs to the SKP1 family. | 0.999 |
LOC111233101 | kdm7a | ENSSDUP00000031008 | ENSSDUP00000026606 | Zgc:77151. | Lysine (K)-specific demethylase 7Ab. | 0.517 |
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