STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111222389Down syndrome cell adhesion molecule a. (1893 aa)    
Predicted Functional Partners:
LOC111220276
Netrin 2.
   
 0.636
LOC111238058
Netrin 1b.
   
 0.572
NTN1
Netrin 1.
   
 0.572
LOC111233011
Netrin 5.
   
 0.557
neo1
Neogenin 1b.
   
0.529
dcc
DCC netrin 1 receptor.
   
0.529
LOC111219170
Immunoglobulin superfamily, DCC subclass, member 4.
   
0.483
pak1
Non-specific serine/threonine protein kinase.
   
 0.435
PAK3
Non-specific serine/threonine protein kinase.
   
 0.435
PAK2
Non-specific serine/threonine protein kinase.
   
 0.402
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.