STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111229572Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. (177 aa)    
Predicted Functional Partners:
ncoa4
Nuclear receptor coactivator 4.
     
  0.900
gak
Cyclin G associated kinase.
     
 0.614
LOC111234312
Peroxiredoxin 4.
  
  
 0.496
LOC111231988
Peroxiredoxin 6.
  
  
 0.433
LOC111218003
Peroxiredoxin 2.
  
  
 0.433
LOC111229003
Thioredoxin domain-containing protein.
  
  
 0.433
LOC111228805
Peroxiredoxin 1.
  
  
 0.433
dennd10
DENN domain containing 10.
  
  
 0.433
prdx3
Peroxiredoxin 3.
  
  
 0.433
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
  
 0.432
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (22%) [HD]