Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHST8 | ENSSDUP00000000433 | ENSSDUP00000009934 | ENSSDUP00000000433 | Carbohydrate sulfotransferase. | Carbohydrate sulfotransferase. | 0.902 |
CHST8 | chst2 | ENSSDUP00000009934 | ENSSDUP00000008021 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.535 |
CHST8 | pald1 | ENSSDUP00000009934 | ENSSDUP00000027048 | Carbohydrate sulfotransferase. | Phosphatase domain containing paladin 1a. | 0.487 |
ENSSDUP00000000433 | CHST8 | ENSSDUP00000000433 | ENSSDUP00000009934 | Carbohydrate sulfotransferase. | Carbohydrate sulfotransferase. | 0.902 |
ENSSDUP00000000433 | chst2 | ENSSDUP00000000433 | ENSSDUP00000008021 | Carbohydrate sulfotransferase. | Sulfotransferase; Belongs to the sulfotransferase 1 family. | 0.426 |
ENSSDUP00000000433 | pald1 | ENSSDUP00000000433 | ENSSDUP00000027048 | Carbohydrate sulfotransferase. | Phosphatase domain containing paladin 1a. | 0.487 |
LOC111220242 | LOC111220465 | ENSSDUP00000003515 | ENSSDUP00000012008 | Zinc finger protein 646. | Syntaxin 4; Belongs to the syntaxin family. | 0.440 |
LOC111220242 | pald1 | ENSSDUP00000003515 | ENSSDUP00000027048 | Zinc finger protein 646. | Phosphatase domain containing paladin 1a. | 0.431 |
LOC111220465 | LOC111220242 | ENSSDUP00000012008 | ENSSDUP00000003515 | Syntaxin 4; Belongs to the syntaxin family. | Zinc finger protein 646. | 0.440 |
LOC111220465 | pald1 | ENSSDUP00000012008 | ENSSDUP00000027048 | Syntaxin 4; Belongs to the syntaxin family. | Phosphatase domain containing paladin 1a. | 0.563 |
LOC111220465 | parp2 | ENSSDUP00000012008 | ENSSDUP00000008718 | Syntaxin 4; Belongs to the syntaxin family. | Poly [ADP-ribose] polymerase. | 0.561 |
acp1 | pald1 | ENSSDUP00000023298 | ENSSDUP00000027048 | LMWPc domain-containing protein. | Phosphatase domain containing paladin 1a. | 0.472 |
adamts14 | pald1 | ENSSDUP00000027256 | ENSSDUP00000027048 | ADAM metallopeptidase with thrombospondin type 1 motif, 14. | Phosphatase domain containing paladin 1a. | 0.539 |
adamts14 | parp2 | ENSSDUP00000027256 | ENSSDUP00000008718 | ADAM metallopeptidase with thrombospondin type 1 motif, 14. | Poly [ADP-ribose] polymerase. | 0.441 |
chst2 | CHST8 | ENSSDUP00000008021 | ENSSDUP00000009934 | Sulfotransferase; Belongs to the sulfotransferase 1 family. | Carbohydrate sulfotransferase. | 0.535 |
chst2 | ENSSDUP00000000433 | ENSSDUP00000008021 | ENSSDUP00000000433 | Sulfotransferase; Belongs to the sulfotransferase 1 family. | Carbohydrate sulfotransferase. | 0.426 |
chst2 | pald1 | ENSSDUP00000008021 | ENSSDUP00000027048 | Sulfotransferase; Belongs to the sulfotransferase 1 family. | Phosphatase domain containing paladin 1a. | 0.448 |
pald1 | CHST8 | ENSSDUP00000027048 | ENSSDUP00000009934 | Phosphatase domain containing paladin 1a. | Carbohydrate sulfotransferase. | 0.487 |
pald1 | ENSSDUP00000000433 | ENSSDUP00000027048 | ENSSDUP00000000433 | Phosphatase domain containing paladin 1a. | Carbohydrate sulfotransferase. | 0.487 |
pald1 | LOC111220242 | ENSSDUP00000027048 | ENSSDUP00000003515 | Phosphatase domain containing paladin 1a. | Zinc finger protein 646. | 0.431 |
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