STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000027563Uncharacterized protein. (460 aa)    
Predicted Functional Partners:
ENSSDUP00000027504
VWFD domain-containing protein.
 
 
0.915
ENSSDUP00000016048
Uncharacterized protein.
 
  
  0.903
LOC111229603
Uncharacterized protein.
 
     
0.861
MSL2
MSL complex subunit 2.
    
 0.650
LOC111226218
MSL complex subunit 2.
    
 0.650
maml1
Mastermind-like transcriptional coactivator 1.
   
 0.582
LOC111229602
Uncharacterized protein.
 
    
0.582
LOC111231549
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.516
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.516
LOC111224365
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.516
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.