Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GABARAPL2 | LOC111219998 | ENSSDUP00000027676 | ENSSDUP00000015051 | GABA type A receptor associated protein like 2. | NBR1 autophagy cargo receptor a. | 0.994 |
GABARAPL2 | LOC111231550 | ENSSDUP00000027676 | ENSSDUP00000007294 | GABA type A receptor associated protein like 2. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.808 |
GABARAPL2 | LOC111236255 | ENSSDUP00000027676 | ENSSDUP00000024349 | GABA type A receptor associated protein like 2. | PB1 domain-containing protein. | 0.994 |
GABARAPL2 | LOC111238063 | ENSSDUP00000027676 | ENSSDUP00000023747 | GABA type A receptor associated protein like 2. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.841 |
GABARAPL2 | atg12 | ENSSDUP00000027676 | ENSSDUP00000013333 | GABA type A receptor associated protein like 2. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.845 |
GABARAPL2 | atg3 | ENSSDUP00000027676 | ENSSDUP00000030440 | GABA type A receptor associated protein like 2. | Autophagy-related protein 3. | 0.952 |
GABARAPL2 | atg4b | ENSSDUP00000027676 | ENSSDUP00000030799 | GABA type A receptor associated protein like 2. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.966 |
GABARAPL2 | atg4c | ENSSDUP00000027676 | ENSSDUP00000018579 | GABA type A receptor associated protein like 2. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.808 |
GABARAPL2 | atg5 | ENSSDUP00000027676 | ENSSDUP00000003161 | GABA type A receptor associated protein like 2. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.828 |
GABARAPL2 | atg7 | ENSSDUP00000027676 | ENSSDUP00000021505 | GABA type A receptor associated protein like 2. | ATG7 autophagy related 7 homolog (S. cerevisiae). | 0.955 |
LOC111219998 | GABARAPL2 | ENSSDUP00000015051 | ENSSDUP00000027676 | NBR1 autophagy cargo receptor a. | GABA type A receptor associated protein like 2. | 0.994 |
LOC111219998 | LOC111231550 | ENSSDUP00000015051 | ENSSDUP00000007294 | NBR1 autophagy cargo receptor a. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.478 |
LOC111219998 | LOC111236255 | ENSSDUP00000015051 | ENSSDUP00000024349 | NBR1 autophagy cargo receptor a. | PB1 domain-containing protein. | 0.998 |
LOC111219998 | LOC111238063 | ENSSDUP00000015051 | ENSSDUP00000023747 | NBR1 autophagy cargo receptor a. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.478 |
LOC111219998 | atg12 | ENSSDUP00000015051 | ENSSDUP00000013333 | NBR1 autophagy cargo receptor a. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.838 |
LOC111219998 | atg3 | ENSSDUP00000015051 | ENSSDUP00000030440 | NBR1 autophagy cargo receptor a. | Autophagy-related protein 3. | 0.707 |
LOC111219998 | atg4b | ENSSDUP00000015051 | ENSSDUP00000030799 | NBR1 autophagy cargo receptor a. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.478 |
LOC111219998 | atg4c | ENSSDUP00000015051 | ENSSDUP00000018579 | NBR1 autophagy cargo receptor a. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.478 |
LOC111219998 | atg5 | ENSSDUP00000015051 | ENSSDUP00000003161 | NBR1 autophagy cargo receptor a. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.849 |
LOC111219998 | atg7 | ENSSDUP00000015051 | ENSSDUP00000021505 | NBR1 autophagy cargo receptor a. | ATG7 autophagy related 7 homolog (S. cerevisiae). | 0.723 |
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