STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc17a5Solute carrier family 17 member 5. (493 aa)    
Predicted Functional Partners:
LOC111220822
Si:ch1073-513e17.1.
  
  
 
0.903
ENSSDUP00000000294
PDZ domain-containing protein.
   
 
 0.717
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.717
wdfy2
WD repeat and FYVE domain containing 2.
      
 0.562
LOC111217884
Uncharacterized protein.
     
 0.503
LOC111220678
Regulating synaptic membrane exocytosis 1a.
     
 0.444
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.443
LOC111220141
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.443
LOC111219363
Uncharacterized protein.
   
 
 0.441
LOC111228632
Synaptotagmin Ib.
   
 
 0.441
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.