STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111233043Neuroligin 4 X-linked a. (859 aa)    
Predicted Functional Partners:
LOC111219591
Neurexin 1.
   
 0.960
LOC111220548
Neurexin 1.
   
 0.618
LOC111236123
Neurexin 3b.
   
 0.616
nrxn3
Uncharacterized protein.
   
 0.616
LOC111234540
Uncharacterized protein.
   
 0.610
Nrxn2
Uncharacterized protein.
   
 0.610
wdr43
WD repeat domain 43.
   
 0.579
LOC111237131
MAM domain containing glycosylphosphatidylinositol anchor 2a.
   
 0.561
LOC111222199
MAM domain containing glycosylphosphatidylinositol anchor 1.
   
 0.561
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2.
   
 0.561
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.