STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111221432Si:ch211-25d12.7. (225 aa)    
Predicted Functional Partners:
LOC111236039
Cbl proto-oncogene C, E3 ubiquitin protein ligase.
  
 
 0.812
cblb
Cbl proto-oncogene B, E3 ubiquitin protein ligase.
    
 0.766
LOC111217085
Uncharacterized protein.
    
 0.766
cbl
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.766
LOC111235530
Uncharacterized protein.
   
 0.634
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.621
tmem201
Transmembrane protein 201.
      
 0.567
tradd
Tnfrsf1a-associated via death domain.
    
 0.548
ENSSDUP00000032017
Uncharacterized protein.
   
 
 0.511
birc6
Baculoviral IAP repeat containing 6.
   
 0.509
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.