STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc173Coiled-coil domain containing 173. (548 aa)    
Predicted Functional Partners:
cfap126
Cilia and flagella associated protein 126.
   
   0.810
cunh1orf194
Uncharacterized protein.
   
   0.797
cfap52
Cilia and flagella associated protein 52.
   
  0.793
tekt3
Tektin 3.
   
   0.789
tekt2
Tektin 2 (testicular).
   
 
 0.787
mns1
Meiosis-specific nuclear structural 1.
   
  0.782
efhc1
EF-hand domain (C-terminal) containing 1.
   
   0.777
efhc2
EF-hand domain (C-terminal) containing 2.
   
   0.777
efhb
EF-hand domain family, member B.
   
   0.775
spag8
Sperm associated antigen 8.
    
   0.774
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.