STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000027819ATP/GTP binding protein-like 2. (612 aa)    
Predicted Functional Partners:
tmem192
Transmembrane protein 192.
    
 
 0.581
ttll4
Tubulin tyrosine ligase-like family, member 4.
    
 
 0.559
ttll5
Tubulin tyrosine ligase-like family, member 5.
      
 0.469
CPQ
Carboxypeptidase Q.
      
 0.467
ttll11
Tubulin tyrosine ligase-like family, member 11.
      
 0.465
sec62
SEC62 homolog, preprotein translocation factor.
      
 0.418
ttll12
Tubulin tyrosine ligase-like family, member 12.
      
 0.418
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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