STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaaf1Dynein assembly factor 1, axonemal. (566 aa)    
Predicted Functional Partners:
zmynd10
Zinc finger, MYND-type containing 10.
  
 
 0.706
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
  
 
 
 0.703
dnali1
Dynein, axonemal, light intermediate chain 1.
   
  
 0.661
dnai2
Dynein, axonemal, intermediate chain 2b.
    
 
 0.660
rsph9
Radial spoke head 9 homolog.
   
 0.631
cunh22orf23
Uncharacterized protein.
   
    0.607
ccdc103
Dynein_attach_N domain-containing protein.
   
  
 0.605
cfap298
Cilia and flagella associated protein 298.
      
 0.602
ccdc40
Coiled-coil domain containing 40.
    
 
 0.596
LOC111218078
NME/NM23 family member 8; Belongs to the NDK family.
     
 0.596
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.