STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111237503Phospholipase A(2). (151 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
     
 0.965
ENSSDUP00000025771
Phospholipase A(2).
  
  
0.962
LOC111236628
Phospholipase A2, group XIIA.
     
 0.950
PLA2G12A
Phospholipase A2 group XIIA.
     
 0.945
LOC111227221
PA2c domain-containing protein.
     
 0.945
LOC111220656
Phospholipase A2, group XIIB.
     
 0.937
PLA2G12B
Phospholipase A2 group XIIB.
     
 0.931
LOC111236695
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.907
PLA2G1B
Phospholipase A(2).
  
  
 
0.905
pla2g1b
Phospholipase A(2).
  
  
 
0.902
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.