STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
reps2RALBP1 associated Eps domain containing 2. (669 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.988
LOC111217580
Intersectin 2b.
   
0.964
itsn2
Intersectin 2a.
   
0.964
itsn1
Intersectin 1 (SH3 domain protein).
   
0.960
ralbp1
RalA binding protein 1.
    
 
 0.848
ap2s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.794
ap2a1
AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]
   
 0.782
LOC111234148
AP2 associated kinase 1b.
    
 0.753
ENSSDUP00000028084
AP2 associated kinase 1a.
    
 0.753
bmp2k
BMP2 inducible kinase.
    
 0.746
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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