STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000028084AP2 associated kinase 1a. (516 aa)    
Predicted Functional Partners:
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
 
 
 0.880
LOC111238457
Zgc:172121; Involved in the regulation of homocysteine metabolism.
 
      0.820
gak
Cyclin G associated kinase.
   
0.802
reps1
RALBP1 associated Eps domain containing 1.
    
 0.753
reps2
RALBP1 associated Eps domain containing 2.
    
 0.753
eps15
Epidermal growth factor receptor pathway substrate 15.
   
 0.726
LOC111231035
Uncharacterized protein.
   
 0.726
eps15l1
Epidermal growth factor receptor pathway substrate 15-like 1a.
   
 0.726
ENSSDUP00000007508
Uncharacterized protein.
    
 0.697
LOC111228816
AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]
    
 0.697
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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