STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INPP5AInositol polyphosphate-5-phosphatase A. (413 aa)    
Predicted Functional Partners:
plce1
Phospholipase C, epsilon 1.
   
 
 0.952
LOC111234530
Inositol polyphosphate-5-phosphatase Kb.
   
 
 0.930
itpkb
Kinase; Belongs to the inositol phosphokinase (IPK) family.
     
 0.930
LOC111234200
Inositol polyphosphate-5-phosphatase Ja.
   
 
 0.930
LOC111238136
Kinase; Belongs to the inositol phosphokinase (IPK) family.
     
 0.930
LOC111225692
Kinase; Belongs to the inositol phosphokinase (IPK) family.
     
 0.930
ENSSDUP00000027716
Uncharacterized protein.
   
 
 0.930
LOC111238217
Inositol polyphosphate-5-phosphatase Ka.
   
 
 0.930
plcg2
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.
     
 0.918
plcg1
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.
     
 0.918
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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