STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NTN1Netrin 1. (606 aa)    
Predicted Functional Partners:
neo1
Neogenin 1b.
    
 0.789
dcc
DCC netrin 1 receptor.
    
 0.789
LOC111219170
Immunoglobulin superfamily, DCC subclass, member 4.
    
 0.785
draxin
Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.
    
 
 0.643
igdcc3
Immunoglobulin superfamily, DCC subclass, member 3.
    
 0.616
LOC111230525
Uncharacterized protein.
    
 0.616
LOC111234092
Uncharacterized protein.
    
 0.616
fndc1
Fibronectin type III domain containing 1.
    
 0.596
LOC111222389
Down syndrome cell adhesion molecule a.
   
 0.572
unc5b
Unc-5 netrin receptor B.
    
 0.565
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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