Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000031146 | LOC111217238 | ENSSDUP00000031146 | ENSSDUP00000010931 | Multivesicular body subunit 12Bb. | Si:ch211-284f22.3. | 0.873 |
ENSSDUP00000031146 | LOC111229851 | ENSSDUP00000031146 | ENSSDUP00000028393 | Multivesicular body subunit 12Bb. | Ubiquitin associated protein 1-like a. | 0.421 |
ENSSDUP00000031146 | LOC111230452 | ENSSDUP00000031146 | ENSSDUP00000009395 | Multivesicular body subunit 12Bb. | VPS37C subunit of ESCRT-I. | 0.904 |
ENSSDUP00000031146 | mvb12a | ENSSDUP00000031146 | ENSSDUP00000012479 | Multivesicular body subunit 12Bb. | Uncharacterized protein. | 0.946 |
ENSSDUP00000031146 | mvb12b | ENSSDUP00000031146 | ENSSDUP00000026456 | Multivesicular body subunit 12Bb. | Multivesicular body subunit 12Ba. | 0.905 |
ENSSDUP00000031146 | snf8 | ENSSDUP00000031146 | ENSSDUP00000012594 | Multivesicular body subunit 12Bb. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.840 |
ENSSDUP00000031146 | vps25 | ENSSDUP00000031146 | ENSSDUP00000017139 | Multivesicular body subunit 12Bb. | Vacuolar protein sorting 25 homolog. | 0.852 |
ENSSDUP00000031146 | vps36 | ENSSDUP00000031146 | ENSSDUP00000003813 | Multivesicular body subunit 12Bb. | Vacuolar protein sorting 36 homolog. | 0.845 |
ENSSDUP00000031146 | vps37a | ENSSDUP00000031146 | ENSSDUP00000014337 | Multivesicular body subunit 12Bb. | VPS37A subunit of ESCRT-I. | 0.937 |
ENSSDUP00000031146 | vps37b | ENSSDUP00000031146 | ENSSDUP00000007783 | Multivesicular body subunit 12Bb. | Zgc:114173. | 0.974 |
LOC111217238 | ENSSDUP00000031146 | ENSSDUP00000010931 | ENSSDUP00000031146 | Si:ch211-284f22.3. | Multivesicular body subunit 12Bb. | 0.873 |
LOC111217238 | LOC111229851 | ENSSDUP00000010931 | ENSSDUP00000028393 | Si:ch211-284f22.3. | Ubiquitin associated protein 1-like a. | 0.422 |
LOC111217238 | LOC111230452 | ENSSDUP00000010931 | ENSSDUP00000009395 | Si:ch211-284f22.3. | VPS37C subunit of ESCRT-I. | 0.501 |
LOC111217238 | mvb12a | ENSSDUP00000010931 | ENSSDUP00000012479 | Si:ch211-284f22.3. | Uncharacterized protein. | 0.883 |
LOC111217238 | mvb12b | ENSSDUP00000010931 | ENSSDUP00000026456 | Si:ch211-284f22.3. | Multivesicular body subunit 12Ba. | 0.873 |
LOC111217238 | snf8 | ENSSDUP00000010931 | ENSSDUP00000012594 | Si:ch211-284f22.3. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.807 |
LOC111217238 | vps25 | ENSSDUP00000010931 | ENSSDUP00000017139 | Si:ch211-284f22.3. | Vacuolar protein sorting 25 homolog. | 0.826 |
LOC111217238 | vps36 | ENSSDUP00000010931 | ENSSDUP00000003813 | Si:ch211-284f22.3. | Vacuolar protein sorting 36 homolog. | 0.808 |
LOC111217238 | vps37a | ENSSDUP00000010931 | ENSSDUP00000014337 | Si:ch211-284f22.3. | VPS37A subunit of ESCRT-I. | 0.539 |
LOC111217238 | vps37b | ENSSDUP00000010931 | ENSSDUP00000007783 | Si:ch211-284f22.3. | Zgc:114173. | 0.493 |
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