STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111217472GLOBIN domain-containing protein; Belongs to the globin family. (144 aa)    
Predicted Functional Partners:
LOC111219709
Hemoglobin beta embryonic-2; Belongs to the globin family.
  
0.809
LOC111238335
Microseminoprotein, beta-like.
    
 0.777
LOC111217518
Hemoglobin subunit epsilon 1; Belongs to the globin family.
  
0.777
HBE1
Hemoglobin subunit beta-A.
  
0.777
LOC111217519
Hemoglobin, beta adult 2; Belongs to the globin family.
  
0.775
LOC111217450
GLOBIN domain-containing protein; Belongs to the globin family.
  
 
0.681
LOC111217449
Hemoglobin subunit beta-2.
  
 
0.681
ENSSDUP00000028353
GLOBIN domain-containing protein; Belongs to the globin family.
  
 
0.675
LOC111225863
Cytochrome b5 reductase 4.
   
 0.657
hpx
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
     
 0.416
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.